There are a few things to consider if WordPatch is not running your mods. First, ensure that you have successfully created your rescue script. Then, ensure that your WordPatch license has been activated. Next, ensure that your mod(s) are enabled via the Edit Mod page. If a mod is not currently enabled, the intended functionality is to prevent it from running both manually and automatically. Finally, make sure that your mailer has been properly configured. WordPatch dispatches emails to your configured address to notify you that a mod has been run.
If mods still do not run automatically but run manually when invoked, the API server is likely having trouble reminding your rescue script to run mods. This most likely means that your website is hosted locally or behind a VPN. Please see this article for more information on how to work around this issue by setting up a cron.